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Cysteinyl-tRNA synthetase (SYCO_ARATH; organellar enzyme)

(cysteine-tRNA ligase EC 6.1.1.16)

Gene cDNA Protein
Database accessions AC005311
FASTA format files gene cDNA peptide
Gene structure

Relationships to other CysRSs

SYCO_ARATH SYCC_ARATH SYC_ECOLI SYC_HAEIN SYC_ARCFU SYC_RICPR SYC_AZOBR SYC_MYCTU SYC_TREPA YAF6_SCHPO YNY7_YEAST SYC_HUMAN SYC_MYCGE SYC_MYCPN SYC_HELPY SYC_BACSU SYC_SYNY3 phylogenetic tree

An unnrooted tree from this multiple alignment generated by Clustal X. Clustal X uses a Neighbour Joining algorithm. Terminal branches and branches which occur in 100% of bootstrap repetitions are in black lines and the other less well supported branches in various shades of grey. Plant sequences are indicated in green, other eukaryotic sequences in blue, eubacterial sequences in red and archaebacterial sequences in magenta. Most sequences were obtained from Swissprot.

Subcellular localisation

Our prediction: mitochondria and plastids, based on results from GFP fusions.

MitoProt II prediction:
p(DFMC) = 0.97435 Chloropl/Mitoch index = 0.66 Mitochondrial
 (see full report)

ChloroP predictions:
chloroplast (see full report)

PSORT prediction:
mitochondrial matrix space --- Certainty= 0.672 (see full report)

 SYCO_ARATH-GFP fusion

References

tRNA & aminoacyl-tRNA synthetase table | taaRSAt home page

Last updated January 2, 1999; Ian Small