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The V.A.S.T lab Variation and Abiotic Stress Tolerance |
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Durand S., Bouché N., Perez Strand E., Loudet O., Camilleri C. (2012) Rapid establishment of genetic incompatibility through natural duplication-mediated epigenetic variation. Current Biology (In Press) Supp. Data
Cubillos F.A., Coustham V., Loudet O. (2012) Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants. Current Opinion in Plant Biology (In Press)
Simon M., Simon A., Martins F., Botran L., Tisné S., Granier F., Loudet O., Camilleri C. (2011) DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. The Plant Journal (In Press) Supp. Fig. / Supp. Tab. / Cluster
Trontin C., Tisné S., Bach L., Loudet O. (2011) What does Arabidopsis natural variation teach us (and does not teach us) about adaptation in plants? Current Opinion in Plant Biology 14: 225-231
Lefebvre V., Fortabat M-N., Ducamp A., North H.M., Maia-Grondard A., Trouverie J., Boursiac Y., Mouille G., Durand-Tardif M. (2011) ESKIMO1 disruption in Arabidopsis alters vascular tissue and impairs water transport. PLoS ONE 6(2): e16645 Paper eLink
Vlad D., Rappaport F., Simon M., Loudet O. (2010) Gene transposition causing natural variation for growth in Arabidopsis thaliana. PLoS Genetics 6(5): e1000945 Paper eLink / Supp. Fig. / Supp. Tab.
Kronholm I., Loudet O., de Meaux J. (2010) Influence of mutation rate on estimators of genetic differentiation - lessons from Arabidopsis thaliana. BMC Genetics 11:33
Platt A., Horton M., Huang Y.S., Li Y., Anastasio A.E., Wayan Mulyati N., Ågren J., Bossdorf O., Byers D., Donohue K., Dunning M., Holub E.B., Hudson A., Le Corre V., Loudet O., Roux F., Warthmann N., Weigel D., Rivero L., Scholl R., Nordborg M., Bergelson J., Borevitz J.O. (2010) The scale of population structure in Arabidopsis thaliana PLoS Genetics 6(2): e1000843 Paper eLink
Bikard D., Patel D., Le Metté C., Giorgi V., Camilleri C., Bennett M.J., Loudet O. (2009) Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana Science 323: 623-626 Supp. Data / High Res. Figures / Free Full Text
Balasubramanian S., Schwartz C., Singh A., Warthmann N., Kim M.C., Maloof J.N., Loudet O., Trainer G.T., Dabi T., Borevitz J.O., Chory J., Weigel D. (2009) QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS ONE 4(2): e4318 Paper eLink
Bouchabke O., Quashie M-L., Seoane-Redondo J., Fortabat M-N., Gery C., Yu A., Linderme D., Trouverie J., Granier F., Téoulé E. , Durand-Tardif. M. (2008) Eskimo1 is a key gene involved in water economy as well as cold acclimation and salt tolerance BMC Plant Biology 8: 125 Supp. Data
Loudet O., Michael T.P., Burger B.T., Le Metté C., Mockler T.C., Weigel D., Chory J. (2008) A zinc knuckle protein that negatively controls morning-specific growth in Arabidopsis thaliana Proc. Natl. Acad. Sci. USA (PNAS) 105: 17193-17198 PNAS Supp. Data / Supplementary Tables
Simon M., Loudet O., Durand S., Bérard A., Brunel D., Sennesal F.-X., Durand-Tardif M., Pelletier G., Camilleri C. (2008) QTL mapping in five new large RIL populations of Arabidopsis thaliana genotyped with consensus SNP markers. Genetics 178: 2253-2264 Supp. Data
Bouchabke O., Chang F., Simon M., Voisin R., Pelletier G., Durand-Tardif M. (2008) Natural variation in Arabidopsis thaliana as a tool for highlighting differential drought responses. PLoS ONE 3(2): e1705 Paper eLink
Sicard O., Loudet O., Keurentjes J. J. B., Candresse T., Le Gall O., Revers F., Decroocq V. (2008) Identification of quantitative trait loci controlling symptom development during viral infection in Arabidopsis thaliana. Molecular Plant-Microbe Interaction 21: 198-207
Meng P.-H., Macquet A., Loudet O., Marion-Poll A., North H.M. (2008) Analysis of natural allelic variation controlling Arabidopsis thaliana seed germinability in response to cold and dark: identification of three major quantitative trait loci. Molecular Plant 1: 145-154
Macquet A., Ralet M.-C., Loudet O., Kronenberger J., Mouille G., Marion-Poll A., North H.M. (2007) A naturally occurring mutation in an Arabidopsis accession affects a b-D-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. The Plant Cell 19: 3990-4006
Loudet O., Saliba-Colombani V., Camilleri C., Calenge F., Gaudon V., Koprivova A., North K.A., Kopriva S., Daniel-Vedele F. (2007) Natural variation for sulfate content in Arabidopsis is highly controlled by APR2. Nature Genetics 39: 896-900 Supp. Data
Perchepied L., Kroj T., Tronchet M., Loudet O., Roby D. (2006) Natural variation in partial resistance to Pseudomonas syringae is controlled by two major QTLs in Arabidopsis thaliana. PLoS ONE 1(1): e123 Paper eLink
Calenge F., Saliba-Colombani V., Mahieu S., Loudet O., Daniel-Vedele F., Krapp A. (2006) Natural variation for carbohydrate content in Arabidopsis thaliana: interaction with complex traits dissected by quantitative genetics. Plant Physiology 141: 1630-1643
Kliebenstein D.J., West M.A.L., van Leeuwen H., Loudet O., Doerge R.W., St.Clair D.A. (2006) Identification of QTLs controlling gene expression networks defined a priori. BMC Bioinformatics 7: 308
Barrière Y., Denoue D., Briand M., Simon M., Jouanin L., Durand-Tardif M. (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theoretical and Applied Genetics 113: 163-75
Mouille G., Witucka-Wall H., Bruyant M.P., Loudet O., Rihouey C., Lerouxel O., Lerouge P., Hofte H., Pauly M. (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiology 141: 1035-1044
Diaz C., Saliba-Colombani V., Loudet O., Belluomo P., Moreau L., Daniel-Vedele F., Morot-Gaudry J.-F., Masclaux-Daubresse C. (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant and Cell Physiology 47: 74-83
Reymond M., Svistoonoff S., Loudet O., Nussaume L., Desnos T. (2006) Identification of QTL controlling root growth response to phosphate starvation in Arabidopsis thaliana. Plant, Cell and Environment 29:115-125
Loudet O., Gaudon V., Trubuil A., Daniel-Vedele F. (2005) Quantitative trait loci controlling root growth and architecture in Arabidopsis thaliana confirmed by heterogeneous inbred family. Theoretical and Applied Genetics 110: 742-753
Wolyn D., Borevitz J., Loudet O., Schwartz C., Maloof J., Ecker J., Berry C., Chory J. (2004) Light-response Quantitative Trait Loci identified with composite interval and eXtreme Array Mapping in Arabidopsis thaliana. Genetics 167: 907-917
Loudet O., Chaillou S., Krapp A., Daniel-Vedele F. (2003) Quantitative Trait Loci analysis of water and anion contents in interaction with nitrogen availability in Arabidopsis thaliana. Genetics 163: 711-722
Loudet O., Chaillou S., Merigout P., Talbotec J., Daniel-Vedele F. (2003) Quantitative Trait Loci analysis of nitrogen use efficiency in Arabidopsis. Plant Physiology 131: 345-358
Loudet O., Chaillou S., Camilleri C., Bouchez D., Daniel-Vedele F. (2002) Bay-0 x Shahdara recombinant inbred line population: a powerful tool for the genetic dissection of complex traits in Arabidopsis. Theoretical and Applied Genetics 104: 1173-1184
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